Jul 21, 2025 · The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and …

Standard Nucleotide BLAST BLASTN programs search nucleotide databases using a nucleotide query. more...

New Guide to BLAST home and search pages Blast report description Blast topics Frequently Asked Questions Getting Help ¶ Write to the help desk Mailing list BLAST tutorials About BLAST ¶ NCBI …

This title appears on all BLAST results and saved searches. Enter one or more queries in the top text box and one or more subject sequences in the lower text box. Then use the BLAST button at the …

The NCBI provides a suite of command-line tools to run BLAST called BLAST+. This allows users to perform BLAST searches on their own server without size, volume and database restrictions.

Local alignments algorithms (such as BLAST) are most often used. A global alignment should only be used on sequences that share significant similarity over most of their extents, and then it will …

You can expand a cluster on your BLAST results to view and download a report or the sequences of all member proteins, and you can also perform a BLAST alignment of all the members of the cluster.

The links in the Basic BLAST section of the Home tab lead to BLAST forms that share a common design. Each form has four sections (examples are from nucleotide BLAST):

Mar 17, 2025 · The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and …

Smart Blast searches a protein query against the landmark database Enter Protein Query Sequence